Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mnx1Motor neuron and pancreas homeobox 1. (400 aa)    
Predicted Functional Partners:
ptf1a
Pancreas associated transcription factor 1a.
    
 
 0.727
tbx20
T-box transcription factor 20.
    
 
 0.719
rfx4
Regulatory factor X, 4.
      
 0.648
OLIG2
Class B basic helix-loop-helix protein 1/6/7.
   
 0.619
gdf15
TGF_BETA_2 domain-containing protein.
      
 0.598
gphn
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
      
 0.590
LOC101076883
Synaptic vesicle glycoprotein 2.
      
 0.547
rfx6
Regulatory factor X, 6.
      
 0.541
pou3f1
POU domain protein.
    
 
 0.532
neurod1
Neurogenic differentiation factor.
   
 0.529
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]