STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mnx1Motor neuron and pancreas homeobox 1. (400 aa)    
Predicted Functional Partners:
rfx6
Regulatory factor X, 6.
      
 0.566
tbx20
T-box transcription factor 20.
    
 
 0.563
gphn
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
      
 0.547
LOC101076883
Synaptic vesicle glycoprotein 2.
   
  
 0.499
LOC101064246
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
      
 0.497
pou3f1
POU domain protein.
    
 
 0.481
nfasc
Neurofascin homolog (chicken) a.
      
 0.457
ptf1a
Pancreas associated transcription factor 1a.
   
 
 0.451
rfx4
Regulatory factor X, 4.
      
 0.436
onecut1
One cut homeobox 1.
     
 0.432
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.