Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079388WD_REPEATS_REGION domain-containing protein. (1494 aa)    
Predicted Functional Partners:
LOC101078548
Mitogen-activated protein kinase.
    
 
 0.712
aspm
ASH domain-containing protein.
    
 
 0.640
LOC101073575
Mitogen-activated protein kinase.
    
 
 0.564
LOC101070190
Mitogen-activated protein kinase.
    
 
 0.564
mapk10
Mitogen-activated protein kinase.
    
 
 0.564
LOC101066249
Centromere protein J.
      
 0.562
ENSTRUP00000087241
annotation not available
    
 
 0.544
stil
STIL centriolar assembly protein.
   
  
 0.527
cep170b
Centrosomal protein 170B.
    
 
 0.515
ENSTRUP00000072642
FHA domain-containing protein.
    
 
 0.515
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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