STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neurl1Neuralized E3 ubiquitin protein ligase 1Aa. (571 aa)    
Predicted Functional Partners:
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.760
cand1
Cullin-associated and neddylation-dissociated 1.
     
 0.712
znrf2
Zinc and ring finger 2b.
      
 0.660
rapsn
Receptor-associated protein of the synapse, 43kD.
      
 0.655
mrpl15
Mitochondrial ribosomal protein L15.
      
 0.578
C15h21orf91
Zgc:110006.
      
 0.566
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
     
 0.566
slc25a21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.515
LOC101077097
NBR1 autophagy cargo receptor b.
   
 
 0.498
ENSTRUP00000049325
GSAP-16 domain-containing protein.
   
 
 0.498
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.