Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sympkSymplekin. (1212 aa)    
Predicted Functional Partners:
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.999
LOC101075419
Cleavage and polyadenylation specific factor 3.
   
 0.999
cpsf4
Cleavage and polyadenylation specific factor 4.
   
 0.998
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.997
fip1l1
FIP1 like 1b (S. cerevisiae).
   
 0.995
PAPOLG
Poly(A) polymerase gamma.
   
 0.994
cstf2
RRM domain-containing protein.
   
 0.991
pcf11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.991
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.987
cpeb1
Cytoplasmic polyadenylation element binding protein 1b.
    
 
 0.970
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.