STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbnl2aMuscleblind-like protein 2a; Involved in pre-mRNA alternative splicing regulation. RNA- binding protein that binds to 5'ACACCC-3' core sequence (By similarity). (389 aa)    
Predicted Functional Partners:
LOC101073060
RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.
    
 
 0.506
rbm24
RNA binding motif protein 24a.
    
 
 0.452
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
      
 0.447
LOC101065207
Aryl hydrocarbon receptor nuclear translocator-like 2.
      
 0.447
LOC101064540
RAR-related orphan receptor C.
      
 0.429
npas1
Neuronal PAS domain protein 1.
      
 0.426
LOC101077956
SIM bHLH transcription factor 1.
      
 0.405
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.