close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078618RAB42, member RAS oncogene family a. (218 aa)    
Predicted Functional Partners:
LOC101074386
Sequestosome 1.
    
 0.905
LOC101078682
Smith-Magenis syndrome chromosome region, candidate 8a.
    
 0.678
LOC101070002
Smith-Magenis syndrome chromosome region, candidate 8b.
    
 0.678
c9orf72
Zgc:100846.
    
  0.671
wdr41
WD repeat domain 41.
     
  0.650
exoc4
Exocyst complex component 4.
    
 0.596
exoc1
Exocyst complex component 1.
   
 0.583
rab3ip
RAB3A interacting protein (rabin3).
    
 0.577
LOC101062762
RAB3A interacting protein (rabin3)-like 1.
    
 0.577
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.572
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (30%) [HD]