Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
nrarpNOTCH regulated ankyrin repeat protein a. (112 aa)    
Predicted Functional Partners:
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.958
rbpjl
Recombining binding protein suppressor of hairless-like protein isoform X1.
   
 0.933
LOC101062685
Notch receptor 1a.
    
 0.826
LOC101067059
Notch receptor 1b.
    
 0.826
H2SJJ2_TAKRU
Basic helix-loop-helix family, member e23.
      
 0.517
LOC101073201
TUB like protein 4b; Belongs to the TUB family.
      
 0.512
tulp4
TUB like protein 4a; Belongs to the TUB family.
      
 0.512
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.501
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.475
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.475
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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