Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077905Uncharacterized protein. (664 aa)    
Predicted Functional Partners:
zbtb20
Zinc finger and BTB domain containing 20.
    
   0.720
btbd9
BTB (POZ) domain containing 9.
      
 0.692
fam185a
Family with sequence similarity 185 member A.
      
 0.589
mrps33
Mitochondrial ribosomal protein S33.
    
 0.516
c4h10orf12-2
Uncharacterized protein.
  
 
   0.456
ENSTRUP00000054486
Uncharacterized protein.
  
     0.451
mysm1
Histone H2A deubiquitinase MYSM1.
    
  0.442
fam217b
Uncharacterized protein.
  
     0.419
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.417
ENSTRUP00000052634
Junctional cadherin 5 associated a.
  
     0.414
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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