STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb6Ankyrin repeat and SOCS box containing 6. (436 aa)    
Predicted Functional Partners:
cul5
Cullin 5a; Belongs to the cullin family.
    
 0.835
rnf41
Ring finger protein 41.
   
 0.808
rnf7
Ring finger protein 7.
    
 0.748
asb1
Ankyrin repeat and SOCS box containing 1.
  
 
 0.738
asb12
Ankyrin repeat and SOCS box-containing 12b.
  
  
 0.631
LOC101071101
Ankyrin repeat and SOCS box containing 11.
  
 
 0.620
commd8
COMM domain containing 8.
   
  0.619
asb7
Ankyrin repeat and SOCS box containing 7.
    
 0.616
asb7-2
Ankyrin repeat and SOCS box containing 7.
    
 0.616
LOC101074622
Ankyrin repeat and SOCS box containing 2b.
  
  
 0.609
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.