STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sntb1Syntrophin, basic 1. (546 aa)    
Predicted Functional Partners:
sntb2
Syntrophin, beta 2.
  
  
 
0.903
SNTA1
Syntrophin alpha 1.
  
  
 
0.903
LOC101078584
Dystroglycan 1.
    
 0.878
LOC101073584
Peptidase S72 domain-containing protein.
    
 0.878
LOC101067437
Sarcoglycan, alpha.
    
 0.859
sntg1
Syntrophin, gamma 1.
    
0.855
LOC101064488
Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
   
 0.832
DMD
Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
   
 0.832
SGCZ
Sarcoglycan zeta.
     
 0.831
Dtna
Dystrobrevin, alpha.
   
 0.830
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.