Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2TMF3_TAKRUCyclic nucleotide gated channel subunit alpha 1a. (631 aa)    
Predicted Functional Partners:
LOC101074936
Si:dkey-44k1.5.
  
0.971
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.942
calml4
Calmodulin-like 4a.
    
 0.917
H2RYE3_TAKRU
EF-hand domain-containing protein.
    
 0.917
ENSTRUP00000068713
Cyclic nucleotide-gated cation channel beta-3-like.
  
0.875
LOC101072926
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.873
cnga3
Cyclic nucleotide gated channel subunit alpha 3a.
  
 
 
0.558
cnga4
Cyclic nucleotide gated channel subunit alpha 4.
  
  
 
0.558
guca1b
Guanylate cyclase activating protein 2.
   
 0.555
H2SEP8_TAKRU
Cyclic nucleotide-binding domain-containing protein.
  
  
 
0.553
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.