STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
iduaIduronidase alpha-L-. (647 aa)    
Predicted Functional Partners:
LOC101066362
Iduronate 2-sulfatase.
     
 0.973
sgsh
N-sulfoglucosamine sulfohydrolase (sulfamidase).
   
 0.957
ARSB
Arylsulfatase B.
   
 0.951
SPAM1
Hyaluronidase.
    
 0.943
HYAL2
Hyaluronidase.
    
 0.924
HYAL2-2
Hyaluronidase.
    
 0.924
LOC101072113
Hyaluronidase.
    
 0.924
LOC101074427
Hyaluronidase.
    
 0.921
LOC101068133
Hyaluronidase.
    
 0.917
LOC101072329
Hyaluronidase.
    
 0.917
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.