STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000025905annotation not available (113 aa)    
Predicted Functional Partners:
C8h11orf68
Zgc:63470.
   
   0.864
eif5
Eukaryotic translation initiation factor 5.
   
 0.835
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.806
paip1
Poly(A) binding protein interacting protein 1.
   
 0.771
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.771
LOC101080242
Uncharacterized protein.
   
 0.771
eif4g3
Eukaryotic translation initiation factor 4 gamma, 3a.
   
 0.771
lyve1
Eukaryotic translation initiation factor 4, gamma 2a.
   
 0.757
EIF4A1
Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family.
   
 0.748
LOC101076470
Eukaryotic initiation factor 4A-I-like.
   
 0.748
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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