STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064263Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.977
jarid2
Jumonji, AT rich interactive domain 2b.
    
 0.972
suz12
SUZ12 polycomb repressive complex 2 subunit b.
    
 0.964
LOC101077477
VEFS-Box domain-containing protein.
    
 0.964
AEBP2
AE binding protein 2.
  
  
 
0.902
LOC101074167
WD_REPEATS_REGION domain-containing protein.
    
 0.888
rbbp4
Retinoblastoma binding protein 4.
    
 0.888
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.753
rps27a
Ribosomal protein S27a.
    
  0.746
pcgf1
Polycomb group ring finger 1.
    
 0.714
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.