STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bmerb1BMERB domain containing 1. (199 aa)    
Predicted Functional Partners:
dctn4
Dynactin 4.
    
   0.768
LOC101066651
CAP-Gly domain-containing protein.
    
   0.643
ENSTRUP00000085655
Dynactin subunit 1-like isoform X1.
    
   0.643
LOC101074115
Actin related protein 1, centractin.
    
   0.642
actr10
Actin related protein 10; Belongs to the actin family.
    
   0.641
fopnl
Fgfr1op N-terminal like.
      
 0.618
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.613
LOC101077749
Uncharacterized protein.
    
   0.573
LOC101077749-2
Uncharacterized protein.
    
   0.573
LOC101072655
Dynactin subunit 6.
    
   0.573
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.