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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrap3Thyroid hormone receptor associated protein 3b. (876 aa)    
Predicted Functional Partners:
trip11
Thyroid hormone receptor interactor 11.
   
 0.578
trip4
Thyroid hormone receptor interactor 4.
      
 0.554
spon2
Spondin 2b, extracellular matrix protein.
      
 0.548
trip12
Thyroid hormone receptor interactor 12.
   
 0.526
setbp1
SET binding protein 1.
  
   0.516
wdr18
WD repeat domain 18.
   
 0.490
cobl
Cordon-bleu WH2 repeat protein.
  
 
 0.481
col11a1
Collagen, type XI, alpha 1a.
    
 0.480
adar
Adenosine deaminase RNA specific.
   
  
 0.472
nr2c2
Nuclear receptor subfamily 2, group C, member 2.
    
 0.468
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.