STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnih1Cornichon family AMPA receptor auxiliary protein 1. (160 aa)    
Predicted Functional Partners:
prpf19
Pre-mRNA processing factor 19.
 
      0.881
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.768
LOC101078401
Transmembrane emp24 domain-containing protein 10; Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side (By similarity).
   
 0.739
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.739
LOC101078054
Uncharacterized protein.
    
 0.733
gria1
Glutamate receptor, ionotropic, AMPA 1a.
    
 0.733
LOC101078102
Uncharacterized protein.
    
 0.733
ENSTRUP00000084846
Uncharacterized protein.
    
 0.733
LOC101064121
Glutamate receptor, ionotropic, AMPA 3a.
    
 0.733
LOC101075609
Glutamate receptor 3 isoform X3.
    
 0.733
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (26%) [HD]