STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064767Uncharacterized protein. (530 aa)    
Predicted Functional Partners:
LOC101072031
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
     
 0.939
ENSTRUP00000062371
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like isoform X1.
     
 0.935
mgat5b
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
     
 0.935
LOC101074995
Uncharacterized protein.
     
 0.919
LOC105418847
Uncharacterized protein.
  
  
 
0.904
mgat4c
Mgat4 family member C.
  
  
 
0.900
fam221a
Family with sequence similarity 221 member A.
   
  
 0.524
galnt8
Polypeptide N-acetylgalactosaminyltransferase.
    
 
 0.475
LOC101061591
Zgc:153675.
      
 0.438
npas4
BHLH domain-containing protein.
   
    0.436
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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