Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
spred3Sprouty related EVH1 domain containing 3. (523 aa)    
Predicted Functional Partners:
SPHK1
Sphingosine kinase 1.
      
 0.703
H2RNL9_TAKRU
Heat shock transcription factor 4.
      
 0.701
LOC101073693
Estrogen-related receptor gamma b.
      
 0.701
c11h19orf54
Zgc:153119.
      
 0.623
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
      
 0.615
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
      
 0.596
kctd14
Potassium channel tetramerization domain containing 14.
      
 0.593
nek2
NIMA-related kinase 2.
    
 0.561
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
      
 0.546
LOC101071062
Sprouty related EVH1 domain containing 2a.
     
  0.530
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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