Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101064586 | LOC101071406 | ENSTRUP00000066127 | ENSTRUP00000059967 | Serine--pyruvate aminotransferase. | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.976 |
LOC101064586 | LOC101075777 | ENSTRUP00000066127 | ENSTRUP00000007857 | Serine--pyruvate aminotransferase. | Malate synthase-like. | 0.907 |
LOC101064586 | LOC101076742 | ENSTRUP00000066127 | ENSTRUP00000023895 | Serine--pyruvate aminotransferase. | Glyoxylate reductase/hydroxypyruvate reductase a; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.972 |
LOC101064586 | agxt2 | ENSTRUP00000066127 | ENSTRUP00000029509 | Serine--pyruvate aminotransferase. | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.978 |
LOC101064586 | dao | ENSTRUP00000066127 | ENSTRUP00000036832 | Serine--pyruvate aminotransferase. | D-amino-acid oxidase, tandem duplicate 2. | 0.966 |
LOC101064586 | glyctk | ENSTRUP00000066127 | ENSTRUP00000053120 | Serine--pyruvate aminotransferase. | Glycerate kinase. | 0.934 |
LOC101064586 | hyi | ENSTRUP00000066127 | ENSTRUP00000026188 | Serine--pyruvate aminotransferase. | Putative hydroxypyruvate isomerase; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde); Belongs to the hyi family. | 0.900 |
LOC101071406 | LOC101064586 | ENSTRUP00000059967 | ENSTRUP00000066127 | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Serine--pyruvate aminotransferase. | 0.976 |
LOC101071406 | LOC101075777 | ENSTRUP00000059967 | ENSTRUP00000007857 | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Malate synthase-like. | 0.732 |
LOC101071406 | LOC101076742 | ENSTRUP00000059967 | ENSTRUP00000023895 | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glyoxylate reductase/hydroxypyruvate reductase a; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.901 |
LOC101071406 | agxt2 | ENSTRUP00000059967 | ENSTRUP00000029509 | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.851 |
LOC101071406 | dao | ENSTRUP00000059967 | ENSTRUP00000036832 | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | D-amino-acid oxidase, tandem duplicate 2. | 0.856 |
LOC101071406 | glyctk | ENSTRUP00000059967 | ENSTRUP00000053120 | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycerate kinase. | 0.962 |
LOC101071406 | hyi | ENSTRUP00000059967 | ENSTRUP00000026188 | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative hydroxypyruvate isomerase; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde); Belongs to the hyi family. | 0.920 |
LOC101075777 | LOC101064586 | ENSTRUP00000007857 | ENSTRUP00000066127 | Malate synthase-like. | Serine--pyruvate aminotransferase. | 0.907 |
LOC101075777 | LOC101071406 | ENSTRUP00000007857 | ENSTRUP00000059967 | Malate synthase-like. | Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.732 |
LOC101075777 | LOC101076742 | ENSTRUP00000007857 | ENSTRUP00000023895 | Malate synthase-like. | Glyoxylate reductase/hydroxypyruvate reductase a; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.732 |
LOC101075777 | agxt2 | ENSTRUP00000007857 | ENSTRUP00000029509 | Malate synthase-like. | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.615 |
LOC101075777 | dao | ENSTRUP00000007857 | ENSTRUP00000036832 | Malate synthase-like. | D-amino-acid oxidase, tandem duplicate 2. | 0.738 |
LOC101075777 | dohh | ENSTRUP00000007857 | ENSTRUP00000018128 | Malate synthase-like. | Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family. | 0.774 |
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