Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gata3GATA binding protein 3. (444 aa)    
Predicted Functional Partners:
tbx21
T-box transcription factor 21.
    
 0.927
spi1
Spi-1 proto-oncogene b.
    
 0.843
runx3
Runt-related transcription factor.
    
 0.822
runx1
Runt-related transcription factor.
    
 0.819
LOC101065935
T-cell acute lymphocytic leukemia protein 1; Transcription factor that plays a pivotal role in hemopoietic and endothelial development.
   
 0.808
ENSTRUP00000081256
T-cell acute lymphocytic leukemia protein 1.
   
 0.808
foxa1
Forkhead box A1.
    
 0.807
Glrx3
Glutaredoxin 3.
    
 
 0.769
myb
V-myb avian myeloblastosis viral oncogene homolog.
   
 0.738
il10
Interleukin 10.
   
 
 0.727
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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