STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078128Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (721 aa)    
Predicted Functional Partners:
LOC101062685
Notch receptor 1a.
   
0.901
LOC101067059
Notch receptor 1b.
   
0.901
LOC101078599
Notch receptor 3.
    
0.807
LOC101080224
Notch receptor 2.
    
0.807
hic1
Hypermethylated in cancer 1.
    
 0.629
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.614
LOC101068611
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.576
LOC101076364
Uncharacterized protein LOC101076364.
   
  
 0.522
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.517
H2UTY6_TAKRU
Uncharacterized protein.
    
0.473
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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