STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071814Taxilin alpha. (527 aa)    
Predicted Functional Partners:
stx4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.620
LOC101063396
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.554
LOC101066813
Syntaxin 3A; Belongs to the syntaxin family.
    
 0.554
LOC101067771
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.506
LOC101064639
t-SNARE coiled-coil homology domain-containing protein.
    
 0.506
LOC101076376
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.470
H2SUW0_TAKRU
t-SNARE coiled-coil homology domain-containing protein.
    
 0.427
LOC101075501
t-SNARE coiled-coil homology domain-containing protein.
    
 0.427
LOC101062144
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.421
STX19
Syntaxin 19.
    
 0.418
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.