STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071814Taxilin alpha. (527 aa)    
Predicted Functional Partners:
stx4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.678
LOC101063396
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.629
LOC101066813
Syntaxin 3A; Belongs to the syntaxin family.
    
 0.629
LOC101076376
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.582
LOC101067771
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.582
LOC101064639
t-SNARE coiled-coil homology domain-containing protein.
    
 0.582
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.541
lmcd1
LIM and cysteine-rich domains 1.
      
 0.518
H2RZ11_TAKRU
Ig-like domain-containing protein.
      
 0.513
zfyve26
Zinc finger, FYVE domain containing 26.
      
 0.513
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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