STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101065762Glycoprotein M6Aa. (278 aa)    
Predicted Functional Partners:
LOC101063386
Bromodomain containing 3.
      
 0.641
wasl
WASP like actin nucleation promoting factor a.
      
 0.601
cpe
Carboxypeptidase E.
   
  
 0.558
serpini1
Serpin peptidase inhibitor, clade I (neuroserpin), member 1; Belongs to the serpin family.
   
  
 0.539
ptn
Pleiotrophin.
   
  
 0.480
LOC101069547
Glutamate receptor, metabotropic 8a.
   
  
 0.470
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
   
  
 0.438
ENSTRUP00000060498
Uncharacterized protein.
   
 
 0.424
LOC101079512
Myelin basic protein b.
   
 
 0.424
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.