STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079301Phosphatase and actin regulator 4a. (1055 aa)    
Predicted Functional Partners:
HOMER2
Homer scaffold protein 2.
    
   0.603
tmod3
Tropomodulin 2.
   
   0.572
slitrk6
SLIT and NTRK-like family, member 6.
      
 0.553
LOC101070222
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.518
vax2
Ventral anterior homeobox 2.
      
 0.511
homer3
Homer scaffold protein 3b.
    
   0.492
Plagl2
Pleiomorphic adenoma gene-like 2.
    
 
 0.433
plag1
Pleiomorphic adenoma gene 1.
    
 
 0.433
LOC101064437
IFI56.
    
   0.430
LOC101063171
Uncharacterized protein.
      
 0.428
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.