Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062008Poly (ADP-ribose) glycohydrolase a. (759 aa)    
Predicted Functional Partners:
parp1
Poly [ADP-ribose] polymerase.
    
 0.959
LOC101068748
Poly (ADP-ribose) glycohydrolase, like.
  
  
 
0.908
LOC101076628
Uncharacterized protein.
  
  
 
0.903
parp2
Poly [ADP-ribose] polymerase.
    
 0.898
LOC115250498
X-ray repair complementing defective repair in Chinese hamster cells 1.
    
 
 0.791
LOC101066034
DNA repair protein XRCC1.
    
 
 0.791
parp3
Poly [ADP-ribose] polymerase.
    
 0.767
ENSTRUP00000075448
Poly (ADP-ribose) polymerase family, member 3.
    
 0.767
Parp4
Uncharacterized protein.
    
 0.750
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.710
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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