STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bub3BUB3 mitotic checkpoint protein. (339 aa)    
Predicted Functional Partners:
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.997
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.997
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.996
cdc27
Cell division cycle 27.
   
 0.988
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
   
 0.988
anapc5
Anaphase promoting complex subunit 5.
    
 0.985
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.984
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.979
LOC101075221
Anaphase promoting complex subunit 1.
    
 0.978
ENSTRUP00000053371
Cell division cycle 26 homolog.
    
 0.977
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.