ANKS1A protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ANKS1A

Ankyrin repeat and sterile alpha motif domain containing 1A. (1136 aa)

Predicted Functional Partners:

LOC101066106

0.659

rpn1

0.646

LOC101079789

0.622

cask

0.604

capzb

0.585

snrpb

0.555

LOC101076770

0.537

syngap1

0.537

dab2ip

0.537

LOC101074799

0.537

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKS1A	LOC101066106	ENSTRUP00000026574	ENSTRUP00000030593	Ankyrin repeat and sterile alpha motif domain containing 1A.	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.659
ANKS1A	LOC101074799	ENSTRUP00000026574	ENSTRUP00000075613	Ankyrin repeat and sterile alpha motif domain containing 1A.	Synaptic Ras GTPase activating protein 1a.	0.537
ANKS1A	LOC101076770	ENSTRUP00000026574	ENSTRUP00000008361	Ankyrin repeat and sterile alpha motif domain containing 1A.	RAS protein activator like 3.	0.537
ANKS1A	LOC101079789	ENSTRUP00000026574	ENSTRUP00000082031	Ankyrin repeat and sterile alpha motif domain containing 1A.	Protein phosphatase 1, regulatory (inhibitor) subunit 7.	0.622
ANKS1A	capzb	ENSTRUP00000026574	ENSTRUP00000024811	Ankyrin repeat and sterile alpha motif domain containing 1A.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.585
ANKS1A	cask	ENSTRUP00000026574	ENSTRUP00000029455	Ankyrin repeat and sterile alpha motif domain containing 1A.	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	0.604
ANKS1A	dab2ip	ENSTRUP00000026574	ENSTRUP00000054004	Ankyrin repeat and sterile alpha motif domain containing 1A.	DAB2 interacting protein b.	0.537
ANKS1A	rpn1	ENSTRUP00000026574	ENSTRUP00000086415	Ankyrin repeat and sterile alpha motif domain containing 1A.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.646
ANKS1A	snrpb	ENSTRUP00000026574	ENSTRUP00000053225	Ankyrin repeat and sterile alpha motif domain containing 1A.	Small nuclear ribonucleoprotein-associated protein.	0.555
ANKS1A	syngap1	ENSTRUP00000026574	ENSTRUP00000031218	Ankyrin repeat and sterile alpha motif domain containing 1A.	Synaptic Ras GTPase activating protein 1b.	0.537
LOC101066106	ANKS1A	ENSTRUP00000030593	ENSTRUP00000026574	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.	Ankyrin repeat and sterile alpha motif domain containing 1A.	0.659
LOC101074799	ANKS1A	ENSTRUP00000075613	ENSTRUP00000026574	Synaptic Ras GTPase activating protein 1a.	Ankyrin repeat and sterile alpha motif domain containing 1A.	0.537
LOC101076770	ANKS1A	ENSTRUP00000008361	ENSTRUP00000026574	RAS protein activator like 3.	Ankyrin repeat and sterile alpha motif domain containing 1A.	0.537
LOC101079789	ANKS1A	ENSTRUP00000082031	ENSTRUP00000026574	Protein phosphatase 1, regulatory (inhibitor) subunit 7.	Ankyrin repeat and sterile alpha motif domain containing 1A.	0.622
capzb	ANKS1A	ENSTRUP00000024811	ENSTRUP00000026574	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Ankyrin repeat and sterile alpha motif domain containing 1A.	0.585
capzb	cask	ENSTRUP00000024811	ENSTRUP00000029455	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	0.438
cask	ANKS1A	ENSTRUP00000029455	ENSTRUP00000026574	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	Ankyrin repeat and sterile alpha motif domain containing 1A.	0.604
cask	capzb	ENSTRUP00000029455	ENSTRUP00000024811	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.438
dab2ip	ANKS1A	ENSTRUP00000054004	ENSTRUP00000026574	DAB2 interacting protein b.	Ankyrin repeat and sterile alpha motif domain containing 1A.	0.537
rpn1	ANKS1A	ENSTRUP00000086415	ENSTRUP00000026574	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	Ankyrin repeat and sterile alpha motif domain containing 1A.	0.646