STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cog2Component of oligomeric golgi complex 2. (706 aa)    
Predicted Functional Partners:
cog3
Component of oligomeric golgi complex 3.
   
 0.996
cog1
Component of oligomeric golgi complex 1.
   
 0.995
COG5
Component of oligomeric golgi complex 5.
    
 0.994
cog7
Component of oligomeric golgi complex 7.
    
 0.994
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.994
LOC101065861
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.989
cog4
Component of oligomeric golgi complex 4.
   
 0.970
smim7
Small integral membrane protein 7.
   
 0.953
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
     
 0.843
vps51
VPS51 subunit of GARP complex.
   
 
 0.843
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.