close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srsf7Serine and arginine rich splicing factor 7a. (252 aa)    
Predicted Functional Partners:
srsf1
Serine and arginine rich splicing factor 1a.
   
0.959
nxf1
Zgc:153681.
   
 0.959
LOC101066595
Uncharacterized protein.
   
0.954
SRSF3
Serine and arginine rich splicing factor 3.
   
0.951
LOC105417833
RRM domain-containing protein.
   
0.948
TRA2B
Transformer 2 beta homolog.
   
0.942
srpk1
SRSF protein kinase 1a.
    
 0.917
LOC101079137
Serine/arginine-rich splicing factor 9-like.
   
0.912
LOC101070858
Serine and arginine rich splicing factor 2a.
   
0.846
LOC101074667
RRM domain-containing protein.
   
0.846
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.