STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtbpIg-like domain-containing protein. (882 aa)    
Predicted Functional Partners:
ticrr
Treslin_N domain-containing protein.
   
 0.725
ccnc
Cyclin C; Belongs to the cyclin family.
   
 0.704
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
 
 0.697
mdm2
MDM2 proto-oncogene.
   
 0.644
tbp
TATA box binding protein.
    
 0.583
trf3
TATA box-binding protein-like protein 2; TATA box-binding transcription factor. Members of the TBP family are differentially required to regulate transcription and development during early embryogenesis (By similarity).
    
 0.583
blm
BLM RecQ like helicase.
   
 
 0.556
vwa5b2
VIT domain-containing protein.
    
 
 0.550
C1orf109
C19h1orf109 homolog (H. sapiens).
      
 0.538
BRD2
Bromodomain containing 2.
   
 
 0.504
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.