STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtbpIg-like domain-containing protein. (882 aa)    
Predicted Functional Partners:
mdm2
MDM2 proto-oncogene.
    
 0.963
ticrr
Treslin_N domain-containing protein.
   
 0.869
topbp1
DNA topoisomerase II binding protein 1.
   
 
 0.839
mdm4
MDM4 regulator of p53; Belongs to the MDM2/MDM4 family.
    
 0.833
tbp
TATA box binding protein.
    
 0.724
trf3
TATA box-binding protein-like protein 2; TATA box-binding transcription factor. Members of the TBP family are differentially required to regulate transcription and development during early embryogenesis (By similarity).
    
 0.724
LOC101073011
Ribonuclease P and MRP subunit p25, b.
      
 0.700
C1orf109
C19h1orf109 homolog (H. sapiens).
      
 0.697
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
 
 0.690
LOC101074452
Mago homolog, exon junction complex subunit.
    
 0.663
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.