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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077689U2 small nuclear RNA auxiliary factor 1. (231 aa)    
Predicted Functional Partners:
H2SWV4_TAKRU
RRM domain-containing protein.
   
 0.992
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.992
LOC101065658
Uncharacterized protein.
  
  
 
0.901
srsf1
Serine and arginine rich splicing factor 1a.
   
 0.773
LOC101066595
Uncharacterized protein.
   
 0.773
LOC101070858
Serine and arginine rich splicing factor 2a.
   
 0.764
LOC101074667
RRM domain-containing protein.
   
 0.764
LOC105417833
RRM domain-containing protein.
   
 0.726
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.726
LOC101079137
Serine/arginine-rich splicing factor 9-like.
   
 0.722
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.