Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1149 aa)    
Predicted Functional Partners:
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.900
cwc22
CWC22 spliceosome associated protein homolog.
   
 0.894
slu7
SLU7 homolog, splicing factor.
   
 0.891
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.886
cactin
Cactin.
    
 0.870
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.862
LOC101072761
UTP14C small subunit processome component.
   
 0.852
yju2
YJU2 splicing factor homolog.
   
 0.852
prpf18
PRP18 pre-mRNA processing factor 18 homolog (yeast).
   
 0.850
nkap
NFKB activating protein.
   
 0.847
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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