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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acod1Aconitate decarboxylase 1. (479 aa)    
Predicted Functional Partners:
ENSTRUP00000077609
Uncharacterized protein.
  
  
 
0.902
LOC101075777
Malate synthase-like.
  
  
 0.738
amt
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.738
dmgdh
Dimethylglycine dehydrogenase.
  
 0.736
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.736
sardh
Sarcosine dehydrogenase.
  
 0.736
aifm1
Apoptosis inducing factor mitochondrion associated 1.
  
 0.689
LOC101062705
Apoptosis inducing factor mitochondria associated 5.
  
 0.689
LOC101067169
Sulfide quinone oxidoreductase.
  
 0.689
ENSTRUP00000054247
Sulfide quinone oxidoreductase.
  
 0.689
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.