Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tmem203Transmembrane protein 203. (138 aa)    
Predicted Functional Partners:
snx8
Sorting nexin 8a.
      
 0.709
mysm1
Histone H2A deubiquitinase MYSM1.
      
 0.609
LOC101075215
LIM domain-containing protein.
   
 0.546
LOC101061052
LIM domain-containing protein.
   
 0.546
fmc1
Si:ch1073-314i13.4.
      
 0.518
setd4
SET domain containing 4.
      
 0.518
tp53rk
TP53 regulating kinase.
    
 
 0.491
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.456
timm29
Translocase of inner mitochondrial membrane 29.
      
 0.453
mrpl42
Mitochondrial ribosomal protein L42.
      
 0.443
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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