Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAPTM4BLysosomal protein transmembrane 4 beta. (225 aa)    
Predicted Functional Partners:
laptm4a
Lysosomal protein transmembrane 4 alpha.
  
  
 
0.902
LOC101069529
Lysosomal protein transmembrane 4 beta.
  
  
 
0.901
golga7
Golgin A7.
   
 
 0.611
LOC101076213
Golgin A7 family, member Ba.
   
 
 0.611
SPRY3
Sprouty RTK signaling antagonist 3.
    
   0.587
H2SX87_TAKRU
Sprouty RTK signaling antagonist 2.
    
   0.587
cpq
Peptidase_M28 domain-containing protein.
    
 
 0.583
LOC105419563
Potassium voltage-gated channel delayed-rectifier subfamily S member 1.
      
 0.491
tmem184a
Transmembrane protein 184a.
   
 
 0.454
NDFIP1
Nedd4 family interacting protein 1.
   
 
 0.450
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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