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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc40a1Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (569 aa)    
Predicted Functional Partners:
tfr2
Transferrin receptor 2.
      
 0.725
LOC101062272
Ceruloplasmin; Belongs to the multicopper oxidase family.
    
 0.684
LOC101077456
Hephaestin-like 1b; Belongs to the multicopper oxidase family.
    
 0.672
f8
Uncharacterized protein; Belongs to the multicopper oxidase family.
    
 0.595
LOC445945
Coagulation factor V; Belongs to the multicopper oxidase family.
    
 0.595
nrp2
Neuropilin; Belongs to the neuropilin family.
    
 0.572
LOC101069872
Neuropilin; Belongs to the neuropilin family.
    
 0.572
tfrc
Transferrin receptor 1a.
      
 0.502
LOC101076812
Transferrin receptor 1b.
      
 0.497
fxn
Frataxin.
      
 0.479
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.