STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079300Leucine rich repeat containing 14B. (526 aa)    
Predicted Functional Partners:
pik3ip1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.544
lrrc20
Leucine rich repeat containing 20.
      
 0.542
LOC101077156
Ankyrin repeat and SOCS box-containing 12a.
   
  
 0.539
asb16
Ankyrin repeat and SOCS box containing 16.
   
  
 0.528
LRRC30
Leucine rich repeat containing 30.
   
  
 0.506
osbpl6
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.485
tmem38a
Transmembrane protein 38A.
   
  
 0.448
osbpl7
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.433
asb5
Ankyrin repeat and SOCS box containing 5a.
      
 0.433
asb12
Ankyrin repeat and SOCS box-containing 12b.
   
  
 0.426
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.