Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ube2j2Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast). (261 aa)    
Predicted Functional Partners:
B3galt6
Galactosylxylosylprotein 3-beta-galactosyltransferase.
 
      0.887
LOC101062617
DUF1681 domain-containing protein.
 
    
 0.875
rps27a
Ribosomal protein S27a.
    
 0.868
necap2
DUF1681 domain-containing protein.
 
    
 0.847
marchf6
Membrane-associated ring finger (C3HC4) 6.
    
 
 0.834
LOC101075280
E3 ubiquitin-protein ligase MARCH6-like.
    
 
 0.834
LOC101071293
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
   
 0.815
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 0.815
uba1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.815
uba5
Ubiquitin-like modifier activating enzyme 5.
   
 0.803
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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