STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076023DUF862 domain-containing protein. (195 aa)    
Predicted Functional Partners:
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
 
 0.693
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
   
 
 0.601
timm29
Translocase of inner mitochondrial membrane 29.
      
 0.597
ubqln4
Ubiquilin 4.
    
 
 0.587
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
   0.570
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
   
   0.570
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
   0.570
LOC101062380
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
   0.568
tmbim6
Testis enhanced gene transcript (BAX inhibitor 1); Belongs to the BI1 family.
    
   0.566
psma5
Proteasome subunit alpha type.
    
   0.566
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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