STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076023DUF862 domain-containing protein. (195 aa)    
Predicted Functional Partners:
ubqln4
Ubiquilin 4.
    
 
 0.590
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
   0.569
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
   
   0.569
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
   0.569
LOC101062380
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
   0.568
tmbim6
Testis enhanced gene transcript (BAX inhibitor 1); Belongs to the BI1 family.
    
   0.565
psma5
Proteasome subunit alpha type.
    
   0.565
bag6
BCL2 associated athanogene 6.
    
   0.565
psmb1
Proteasome subunit beta.
    
   0.565
psma1
Proteasome subunit alpha type.
    
   0.565
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.