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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TifaSi:ch211-15b10.6. (193 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.975
alpk1
Alpha kinase 1.
   
 
 0.842
traf4
TNF receptor-associated factor.
    
 0.678
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.636
LOC101064444
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.622
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.622
LOC101075779
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.622
rps27a
Ribosomal protein S27a.
    
  0.609
LOC101061773
Interleukin-1 receptor-associated kinase 1.
    
 0.568
map3k7
Mitogen-activated protein kinase kinase kinase 7.
    
  0.564
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.