STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc66a3Solute carrier family 66 member 3. (206 aa)    
Predicted Functional Partners:
nol10
Nucleolar protein 10.
      
 0.566
yipf4
Protein YIPF.
      
 0.546
dolpp1
Dolichyldiphosphatase 1.
   
  
 0.523
LOC101066410
Uncharacterized protein; Belongs to the potassium channel family.
      
 0.497
H2VBM3_TAKRU
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
      
 0.497
oxa1l
OXA1L mitochondrial inner membrane protein.
      
 0.497
myo16
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.435
LOC101071194
Transmembrane protein 41ab.
   
  
 0.434
tmem41a
Transmembrane protein 41aa.
   
  
 0.434
rmdn2
Regulator of microtubule dynamics 2.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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