STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wbp11Uncharacterized protein. (721 aa)    
Predicted Functional Partners:
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
  0.957
plrg1
Pleiotropic regulator 1.
    
 0.955
ENSTRUP00000039664
CWC15 spliceosome associated protein homolog.
   
  0.954
pqbp1
Polyglutamine binding protein 1.
    
 0.934
ctnnbl1
Catenin, beta like 1.
    
  0.927
prpf19
Pre-mRNA processing factor 19.
     
 0.902
bcas2
BCAS2 pre-mRNA processing factor.
     
 0.899
srrm1
Serine/arginine repetitive matrix 1.
   
 0.889
UBL5
Ubiquitin like 5.
    
 0.874
sf3a2
Splicing factor 3a, subunit 2.
   
 
 0.857
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.