STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066282Acidic (leucine-rich) nuclear phosphoprotein 32 family, member B. (264 aa)    
Predicted Functional Partners:
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.631
LOC101080230
Histone H2A; Belongs to the histone H2A family.
   
 
 0.631
set
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.613
LOC101077101
SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.613
LOC101075139
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.575
XPO1
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.527
ENSTRUP00000083097
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.527
iscu
Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
 
      0.511
LOC101078280
ELAV-like protein; Belongs to the RRM elav family.
   
 0.467
LOC101062657
ELAV-like protein; Belongs to the RRM elav family.
   
 0.467
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.