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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105416356Dickkopf WNT signaling pathway inhibitor 1a. (348 aa)    
Predicted Functional Partners:
lrp6
Low density lipoprotein receptor-related protein 6.
    
 0.990
LOC101069468
Low density lipoprotein receptor-related protein 5.
    
 0.990
dkk2
Dickkopf WNT signaling pathway inhibitor 2.
     
0.955
kremen1
Kringle containing transmembrane protein 1.
    
 0.950
wscd2
WSC domain containing 2.
    
 0.696
LOC101073540
Centromere protein S.
    
 0.696
LOC101072984
Cortistatin.
    
 0.696
ckap4
Uncharacterized protein.
   
 
 0.676
LOC101064830
Low density lipoprotein receptor-related protein 2b.
    
 0.668
H2V9M6_TAKRU
Uncharacterized protein.
    
 0.668
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.