STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSTM2LV-set and transmembrane domain containing 2 like. (256 aa)    
Predicted Functional Partners:
LOC105417823
Proline-rich transmembrane protein 3-like.
   
  
 0.527
LOC101061436
Cytochrome P450, family 4, subfamily V, polypeptide 8; Belongs to the cytochrome P450 family.
      
 0.519
ENSTRUP00000059636
Ankyrin repeat domain-containing protein SOWAHA-like.
      
 0.475
LOC101065996
GNAS complex locus.
      
 0.450
pcsk5
Proprotein convertase subtilisin/kexin type 5b; Belongs to the peptidase S8 family.
      
 0.450
IGFBP3
Insulin like growth factor binding protein 3.
      
 0.446
LOC115247245
Insulin-like growth factor-binding protein 3.
      
 0.446
LOC101079092
Family with sequence similarity 83 member D.
      
 0.445
LOC101073783
Spondin domain-containing protein.
      
 0.443
spon1
Spondin 1a.
      
 0.443
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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