STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069420Uncharacterized protein. (524 aa)    
Predicted Functional Partners:
LOC101062856
Heat shock protein 4a.
  
 0.704
hspa4
Heat shock protein 4b.
  
 0.704
LOC101076976
Heat shock protein 90, alpha (cytosolic), class B member 1.
  
 0.687
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
  
 0.687
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
  
 0.672
LOC101075949
Heat shock protein 4 like.
  
 0.634
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.616
LOC101070860
TSC complex subunit 1b.
  
 0.601
H2UCW4_TAKRU
TSC complex subunit 1.
  
 0.601
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.576
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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