Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
itih2Inter-alpha-trypsin inhibitor heavy chain 2. (944 aa)    
Predicted Functional Partners:
coq3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.746
ppox
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.667
atp5f1c
ATP synthase subunit gamma.
      
 0.654
taf3
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.
      
 0.611
gmps
Guanine monophosphate synthase.
    
  0.589
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
     
  0.527
H2UMT2_TAKRU
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
     
  0.527
LOC101064923
Microseminoprotein, beta-like.
      
 0.519
LOC101076681
Alpha-2-HS-glycoprotein 2.
   
  
 0.518
LOC105417895
Uncharacterized protein.
   
  
 0.518
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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