STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ift22Intraflagellar transport 22 homolog (Chlamydomonas). (184 aa)    
Predicted Functional Partners:
Ift46
Intraflagellar transport protein 46 homolog isoform X1.
    
 0.980
ift88
Intraflagellar transport 88 homolog.
   
 0.977
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.975
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.970
cluap1
Clusterin associated protein 1.
    
 0.967
ift172
Uncharacterized protein.
    
 0.953
hspb11
Zgc:158640.
   
 0.936
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
    
 0.926
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
   
 0.899
ENSTRUP00000053515
Uncharacterized protein.
   
 0.899
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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