STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077870Bicaudal C homolog 2. (909 aa)    
Predicted Functional Partners:
ENSTRUP00000052105
Transmembrane protein 130.
      
 0.562
tent2
Terminal nucleotidyltransferase 2.
   
 
 0.528
kcnk3
Potassium channel subfamily K member.
      
 0.515
nptx1
Uncharacterized protein.
      
 0.501
LOC101079020
Si:ch211-106h4.9.
      
 0.434
mtpap
Mitochondrial poly(A) polymerase.
   
 
 0.432
tut1
Terminal uridylyl transferase 1, U6 snRNA-specific.
   
 
 0.432
ENSTRUP00000076169
Uncharacterized protein.
   
 
 0.432
TUT4
Uncharacterized protein.
   
 
 0.432
ENSTRUP00000083628
annotation not available
   
 
 0.432
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.